Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq104363 98.7 4e-16 >seq104363 Length=468 Score = 98.7 bits (108), Expect = 4e-16 Identities = 144/199 (72%), Gaps = 6/199 (3%) Strand=Plus/Plus Query 56623 ACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTTTCCATAGAC--GATGAGACCCG 56680 ||| ||||||||||||||| || |||||||| || | ||| || | | | | | Sbjct 121 ACAGCGCCTGCTCCAGCGCGTCGAGCACGAACTCGGTGTGCATCGAACTGCTCTGGC--G 178 Query 56681 CCACCCCACGATGTATCCGGCA-AACACATCAATGATAAACGCCACATAGACGAAGCCCT 56739 ||| ||||||||| ||||| ||||| || | | || ||||||||||| |||||| Sbjct 179 CCAGCCCACGATGCG-CCGGCTGAACACGTCCACCACGAATGCCACATAGACCCAGCCCT 237 Query 56740 GCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAGCTGGTCAGGTCGTTCTGCCACGA 56799 |||| || |||||| || || || | ||||||||||||| || || || || || Sbjct 238 GCCAGGTCGAGACGTACGTGAAGTCCGAGACCCACAGCTGGTTGGGCCGCTCGGCACGGA 297 Query 56800 ACTGACGGTTTACGCGGTC 56818 |||| ||||| || ||||| Sbjct 298 ACTGCCGGTTGACCCGGTC 316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199745487267678