Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_014899.1 Length=35203 Score E Sequences producing significant alignments: (Bits) Value seq201746 84.2 5e-12 >seq201746 Length=230 Score = 84.2 bits (92), Expect = 5e-12 Identities = 110/147 (75%), Gaps = 4/147 (3%) Strand=Plus/Minus Query 6490 TTTGGTGGCGAAGGAGCCGTAGAGGGAATTGCTGAGCAGTTTGGCGATGG-AGCGCATCG 6548 || |||||| || || |||||||||| ||| |||| |||||||||| |||||| | Sbjct 175 TTGGGTGGCAAACGACCCGTAGAGGGCGTTGGACAGCAACTTGGCGATGGGAGCGCAGGG 116 Query 6549 -TTTGGtttttttCGCGGTCGGCCTGCTCCTTGGCCTGGATGTTGAGGGTGACGTAGGAG 6607 ||| | ||||| |||| ||||| ||||||||||| |||||| || ||||| | Sbjct 115 GTTTTGGTTTTTGCGCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCG 56 Query 6608 CGGGCCACGCA-GGCCGTCTCGGGAAA 6633 || || ||||| ||| | |||||||| Sbjct 55 CGCGCAACGCACCGCCAT-TCGGGAAA 30 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112096660061620