Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_015252.1 Length=36953 Score E Sequences producing significant alignments: (Bits) Value seq154944 111 4e-20 >seq154944 Length=270 Score = 111 bits (122), Expect = 4e-20 Identities = 116/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 28100 ATTATTGAAAAAGCAGATGGTGAACAGATTTTAACCGTTATGACAAAGAAAGAAATTGAT 28159 || || ||||||| |||||||||| ||||||| || |||||||| || |||||||||||| Sbjct 121 ATCATCGAAAAAGAAGATGGTGAAAAGATTTTGACGGTTATGACCAAAAAAGAAATTGAT 180 Query 28160 ATGGCTTGGTCCAAAACAAAAACTGGCGGAGGCGTTCAAAAGCAGTTCTCGCAAGAAATG 28219 | | | ||||| ||| ||||||| | |||||||| | ||| | ||||| ||| Sbjct 181 AAGTCATGGTCAAAAGCAAAAAC---AAAAAATGTTCAAAATGACTTCCCTCAAGAGATG 237 Query 28220 GCAAAAAGAACAGTAATTAATCGTGCGGCAAA 28251 || ||| | || || |||||||| || || || Sbjct 238 GCCAAACGGACCGTTATTAATCGAGCAGCTAA 269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117675194260620