Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq123332 95.1 1e-14 >seq123332 Length=7778 Score = 95.1 bits (104), Expect = 1e-14 Identities = 211/317 (67%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 158407 GGTGAGTGGGGATTTGACATTGCTGTAGGTAGTATGCAAAGGTTTGGTATTCCTATGGGA 158466 ||||||| ||| ||||||| ||| | || || | || | ||||||| | | || Sbjct 202 GGTGAGTTTGGAGTTGACATCGCTCTTGGAAGCAGTCAGCGCTTTGGTACTTCCCCAGGC 261 Query 158467 TACGGAGGTCCTCATGCTGCATTCTTTGCAACAACAGACAAGTATAAGAGAAAGATACCT 158526 ||||| || || || ||||| |||||||| | |||| | ||| | |||| ||| Sbjct 262 TACGGTGGACCGCACGCTGCCTTCTTTGCCGTCAAAGACTACCTGAAGCGTCAGATGCCT 321 Query 158527 GGCAGAATTGTAGGTCAGTCAGTAGATAGCGAAGGTAATAAAGCATACAGATTAGCACTA 158586 || | ||||| ||| || || || || || ||| || | | || Sbjct 322 GGTCGCATTGTTGGTATCACAAAGGACTCCGCTGGAAACCCAGCCATGAGGCTTTCGCTT 381 Query 158587 CAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGCACAGCACAA 158646 |||||| | || || |||||||| || || || ||||||||||||||||||||| | || Sbjct 382 CAGACTCGGGAACAACATATCAGGAGGGAGAAGGCAACCAGTAACATCTGCACATCTCAG 441 Query 158647 GCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGATGGACTACAT 158706 || || || || || |||| | | || |||| |||||||| | | |||||||| Sbjct 442 GCTCTTCTCGCAAACCTGTCAGCCATGTACGCAGTTTATCATGGACCTCAGGGACTACAC 501 Query 158707 GCTATAGCAAGAAGAAT 158723 || || || ||||| Sbjct 502 CACATTGCTAGGAGAAT 518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 585678457511840