Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_016895.2 Length=31806 Score E Sequences producing significant alignments: (Bits) Value seq201746 134 3e-27 >seq201746 Length=230 Score = 134 bits (148), Expect = 3e-27 Identities = 165/216 (76%), Gaps = 17/216 (8%) Strand=Plus/Minus Query 5667 GCATCTATTTGGTCAGAAAACACCGTCTTTTTGTTGTCAAGCTTGG-TGGCGAAGGAGCC 5725 ||||| || |||||||||| || |||||| ||||| |||||| |||| || || || Sbjct 213 GCATCCATCTGGTCAGAAAG-ACAATCTTTTG--TGTCA-GCTTGGGTGGCAAACGACCC 158 Query 5726 GTAGAGGGCGTTGGAGAGCAGCTTGGCTATGCT-GCGCATGGTTTGGTTTTTATTTTTG- 5783 ||||||||||||||| |||| |||||| ||| ||||| || ||||| |||||| Sbjct 157 GTAGAGGGCGTTGGACAGCAACTTGGCGATGGGAGCGCAGGG----GTTTTGGTTTTTGC 102 Query 5784 ----TCTGCCTGCTCTTTGGCCTGGATGTTTAGCTGCACGTACTCGCGCGCGAGACACTT 5839 || || |||| |||||| |||||||||||||||||| |||||||| | ||| Sbjct 101 GCGATCGGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCG 42 Query 5840 CCACTCGGGGAAGACGGTGGCGCGGGCGTCGGGCAC 5875 ||| ||||| ||| |||| | ||| |||||||||| Sbjct 41 CCATTCGGGAAAG-CGGT-GTGCGCTCGTCGGGCAC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101267928247904