Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq305029 93.3 2e-14 >seq305029 Length=127772 Score = 93.3 bits (102), Expect = 2e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 ||||| ||| |||||| | ||| || ||||| | ||||| || | ||||| |||||| Sbjct 93800 TCAACCCTCTTCATAAAGAGATCAGGGATCCAGAGGGCATAGAACAGATCTCGGGCTCTC 93741 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 ||| || || ||||| ||||| || |||||||||||| ||||| | |||||| Sbjct 93740 TGTTCCTCCTTGCCGTGGTTCTTCTTACAGTCTAAGAAATCATGGATATCAGCATGCCAT 93681 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || |||| ||||| ||||| ||| | || || || |||||||| ||||| Sbjct 93680 GGCTCTAGGTAGATGGCAAAGGCACCAGGACGCTTATTGCCTCCCTGATCTACATATCTA 93621 Query 26102 GCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCA 26140 || || | ||| | || | |||||| | ||| ||| Sbjct 93620 GCTGTATTGTTGTACACACGAAGCATTGGTAATAAACCA 93582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252044527513550