Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq139241 125 6e-24 >seq139241 Length=313 Score = 125 bits (138), Expect = 6e-24 Identities = 188/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 34339 TCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAG 34398 || ||||||| |||| | || |||||| |||| |||| |||||| | || | Sbjct 1 TCGGGACACAGCACATATTTTTTGATGAAGACATCTAGCATGTCCTGAAGTTTGTTAGCA 60 Query 34399 TCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCC 34458 || || ||||| || || ||||| || | || ||| |||| | ||| ||||| || || Sbjct 61 TCATGCGAGCCATTTACAATGAAGCGATTATTCTTGAAATCAAACTGGGTTTGGGCACCA 120 Query 34459 AGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATT 34518 ||||| || || || ||||||| ||||| | | || | | | | |||| | || Sbjct 121 AGCTCACAGCCAAAAAACTTTGTAGGGTATGTAGGTGGTCTACATAAGGACTTGCCAATC 180 Query 34519 TCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAG 34578 || |||||| | ||||||||| || ||||| || || |||| || |||||||| | Sbjct 181 TCCACCATGTTTATGATGACAGTTTTAATGCCATTCCCACTTCCCTCAACCTTGGCTAGG 240 Query 34579 ATGCGCGGCATTTTGTAGCGGTAGAAC 34605 | || ||||| ||||||||||||||| Sbjct 241 AGACGTGGCATCTTGTAGCGGTAGAAC 267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411217459729442