Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq283656 96.9 3e-15 >seq283656 Length=776 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 25187 GTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAACGATACTATCGAG 25246 || |||||||| || || ||| | ||||| |||| || ||| ||| |||||||| || Sbjct 775 GTGAAAACATTGACGGGGAAAACCATCACCCTCGAGGTGGAACCCAGTGATACTATTGAA 716 Query 25247 CAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATT 25306 | ||||| |||||| || || || ||||| || ||||||||||| | || || Sbjct 715 AATGTAAAGGCCAAAATTCAAGACAAGGAAGGTATCCCTCCCGATCAGCAGCGCCTGATC 656 Query 25307 TACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAA 25366 | || |||||| || || ||||||| | | | | || |||||||| || || || Sbjct 655 TTCGCCGGCAAGCAGCTGGAAGATGGCCGCACTCTGTCTGACTACAATATCCAGAAGGAG 596 Query 25367 TCCACCATTCATTTAGTG 25384 |||||| | || || ||| Sbjct 595 TCCACCCTCCACTTGGTG 578 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443298477478080