Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11]
322,794 sequences; 1,061,195,396 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq283656 107 2e-18
seq80839 98.7 9e-16
>seq283656
Length=776
Score = 107 bits (118), Expect = 2e-18
Identities = 155/216 (72%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569
|||||||| | ||| | |||||| || | || |||||| || || ||||| || | |
Sbjct 561 CCACCACGGAGCCTAAGCACCAAGTGGAGGGTGGACTCCTTCTGGATATTGTAGTCAGAC 620
Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629
| || || | || ||||||||||| || || || |||| |||||||| || | |||
Sbjct 621 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 680
Query 35630 ACGCTCTCCTTGTCCATGATCTTTTG-CTTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688
| | ||||||| | ||| ||| | ||| | | || | | || || || | ||||||
Sbjct 681 ATACCTTCCTTGT-CTTGAATTTTGGCCTTTACATTTTCAATAGTATCACTGGGTTCCAC 739
Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
||| | ||||| ||||| |||||||| ||||||||
Sbjct 740 CTCGAGGGTGATGGTTTTCCCCGTCAATGTTTTCAC 775
>seq80839
Length=604
Score = 98.7 bits (108), Expect = 9e-16
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605
||||| || |||||||| || | | ||| || | || || |||||||| || || ||
Sbjct 194 TCCTTCTGGATGTTGTAGTCTGATAGGGTGCGGCCATCTTCAAGCTGCTTGCCAGCGAAG 135
Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665
||||| ||||||||||| | ||||| | || || ||| |||||| ||| | | |
Sbjct 134 ATCAAACGCTGCTGGTCAGGAGGAATACCTTCTTTATCCTGGATCTTAGCCTTGACATTC 75
Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725
| | ||||| | |||||||| | ||||| || || ||||||| || |||||
Sbjct 74 TCTATGGTGTCAGAAGGCTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACG 15
Query 35726 AATATCTGCATTCT 35739
||||||||||| ||
Sbjct 14 AATATCTGCATCCT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448974681633520
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |