Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq99992 158 2e-33 >seq99992 Length=792 Score = 158 bits (174), Expect = 2e-33 Identities = 265/379 (70%), Gaps = 6/379 (2%) Strand=Plus/Minus Query 161313 TCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAA 161372 |||||||||| || ||||||||| ||| ||| ||| ||||||| ||| || || || | Sbjct 708 TCTACCAGGCGTCTACCAGTGAGATGTTTGGCAAGGTTCAAGAGATACCCCAAAAGGAGA 649 Query 161373 CAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTG 161432 | || || ||||| || || || || ||||| | ||| || || |||| || ||||| Sbjct 648 CCACGCCCTTCTATCCCCGTTCCCCTTATGGTGCAGCCAAGCTGTATGCGTACTGGATCA 589 Query 161433 TAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATG 161492 | |||| |||||| ||| ||| || | | |||||| ||||||||||||| Sbjct 588 CGATAAACTTCAGAGAAGCCTATAACATGTTTGCTTGCAATGGTATCCTATTCAACCATG 529 Query 161493 AGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGATTACTAGGGGACTATCCCG-- 161550 || ||| | | ||||| || || || ||| | || || || || | || | || Sbjct 528 AGAGCCCAAGGAGAGGTGAAACATTTGTGACCAGAAAAATCACAAGAG--CTGTTGCGAA 471 Query 161551 TATTAGTACAGGACTACAGGATTGTCTATA-CCTAGGTAATCTAAACTCAAGACGAGATT 161609 ||| ||| | ||||| | || | ||||| || ||| ||||| ||| |||| Sbjct 470 GATTCACTTAGGTCAGCAGGA-AGACTTGAGACTAGGAAACCTAGACTCACAACGTGATT 412 Query 161610 GGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTTGATGTTACAACAGGAAACTCCTG 161669 |||| |||||| |||| ||| | ||||| |||||| |||||||||||||| || || | Sbjct 411 GGGGACATGCTAAAGATTATATAGAGGCCATGTGGCTGATGTTACAACAGAAAGAACCAG 352 Query 161670 ATGACTATGTGATTGCCAC 161688 | |||| ||| || || || Sbjct 351 AAGACTTTGTAATAGCAAC 333 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 726984388808720