Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_031948.1 Length=31481 Score E Sequences producing significant alignments: (Bits) Value seq201746 89.7 1e-13 >seq201746 Length=230 Score = 89.7 bits (98), Expect = 1e-13 Identities = 155/214 (72%), Gaps = 11/214 (5%) Strand=Plus/Minus Query 5630 TCAATTTGGTCAGAAAATACAGtttttttGTTGTCTAACTTCG-TGGCAAACGACCCATA 5688 || || |||||||||| ||| | |||| |||| | ||| | ||||||||||||| || Sbjct 210 TCCATCTGGTCAGAAAG-ACAATCTTTTG--TGTC-AGCTTGGGTGGCAAACGACCCGTA 155 Query 5689 GAGGGCGTTGGAGAGTAGCTTGGCAAT-GCTGCGCATGG--TTTGGTTCTTGCTTTTATC 5745 |||||||||||| || | |||||| || | ||||| || ||||||| |||| ||| Sbjct 154 GAGGGCGTTGGACAGCAACTTGGCGATGGGAGCGCAGGGGTTTTGGTTTTTGC-GCGATC 96 Query 5746 TGCCAGCTCTTTGGCCTGAATGTTAAGTTGCACATATTCTCTAGCAAGACATTTCCACTC 5805 || |||| |||||| ||||| || ||||| ||||| | |||| || ||| || Sbjct 95 GGCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCATTC 36 Query 5806 TGGGAATATGGTGGCTCTCTCATCGGGGACAAGG 5839 ||||| ||| | | ||| ||||| || ||| Sbjct 35 -GGGAAAGCGGT-GTGCGCTCGTCGGGCACCAGG 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100231914753804