Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lytechinus_20variegatus_20[genbank_20GCA_5F000239495.2_202015-03-11] 322,794 sequences; 1,061,195,396 total letters Query= NC_032105.1 Length=33562 Score E Sequences producing significant alignments: (Bits) Value seq201746 158 3e-34 >seq201746 Length=230 Score = 158 bits (174), Expect = 3e-34 Identities = 170/212 (80%), Gaps = 11/212 (5%) Strand=Plus/Minus Query 5995 CCATCTGGTCAGAAAACACAATCTGCTTGTTGTCCAACTTGG-TAGCGAACGACCCGTAG 6053 ||||||||||||||| ||||||| |||| ||| | ||||| | || |||||||||||| Sbjct 209 CCATCTGGTCAGAAAG-ACAATCTT-TTGT-GTC-AGCTTGGGTGGCAAACGACCCGTAG 154 Query 6054 AGGGCGTTGGAGAGCAGCTTGGCGAT-GGAGCGCTGCG--TCTGGTTCTTTTCGCGGTCG 6110 ||||||||||| |||| ||||||||| ||||||| | | | ||||| ||| |||| ||| Sbjct 153 AGGGCGTTGGACAGCAACTTGGCGATGGGAGCGCAGGGGTTTTGGTT-TTTGCGCGATCG 95 Query 6111 GCCTTTTCCTTGGCCGCGATGTTGAGCTGGACGTACTCTCTGGCCACGCACTTCCATCCC 6170 || ||||||||||||||||| ||||| ||||| || | || |||||| |||| | Sbjct 94 GCGCGCTCCTTGGCCGCGATGTTTAGCTGCACGTATTCGCGCGCAACGCACCGCCAT-TC 36 Query 6171 GGGAAGACGGTGGTCCTCTCGTCCGGCACCAG 6202 ||||| |||| || | |||||| |||||||| Sbjct 35 GGGAAAGCGGT-GTGCGCTCGTCGGGCACCAG 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 106865588849872