Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq4827 100 6e-16 seq2932 100 6e-16 seq76749 98.7 2e-15 seq4985 98.7 2e-15 seq2776 98.7 2e-15 seq981 98.7 2e-15 seq3085 87.8 4e-12 >seq4827 Length=2667754 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 256119 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 256178 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 256179 CCCCACGTTGGGC 256191 >seq2932 Length=486623 Score = 100 bits (110), Expect = 6e-16 Identities = 66/73 (90%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| ||||||||||||||||||| | ||||| ||||||| | ||||||||||||||| Sbjct 133298 TGCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAG 133357 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 133358 CCCCACGTTGGGC 133370 >seq76749 Length=1677611 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 911549 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 911490 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 911489 CCCACGTTGGGC 911478 >seq4985 Length=490927 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 16141 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 16082 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 16081 CCCACGTTGGGC 16070 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 165717 TAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCACGA 165776 |||||||||||||||||| | ||||||||||||| | |||||||||| |||||||||| Sbjct 36343 TAGCTCAGTCGGTAGAGCACGAGACTTTTAATCTCGGGGTCGTGGGTACGAGCCCCACAT 36402 Query 165777 TGGGC 165781 ||||| Sbjct 36403 TGGGC 36407 >seq2776 Length=2105875 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 2084562 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 2084503 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 2084502 CCCACGTTGGGC 2084491 >seq981 Length=1734736 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 802359 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 802418 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 802419 CCCACGTTGGGC 802430 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| | ||||| ||||||| | |||||||||||||||| Sbjct 808215 GCCCGGCTAGCTCAGTCGGTAGAGCACGAGACTCTTAATCTCGGGGTCGTGGGTTCGAGC 808156 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 808155 CCCACGTTGGGC 808144 >seq3085 Length=974669 Score = 87.8 bits (96), Expect = 4e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768 |||||| |||| |||||||||||||| | ||||| | ||||| | ||||| ||||||||| Sbjct 355856 TGCCCGGCTAGTTCAGTCGGTAGAGCACGAGACTCTCAATCTCGGGGTCGGGGGTTCGAG 355915 Query 165769 CCCCACGATGGGC 165781 ||||||| ||||| Sbjct 355916 CCCCACGTTGGGC 355928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1056703705542540