Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq53685 89.7 4e-13 >seq53685 Length=437 Score = 89.7 bits (98), Expect = 4e-13 Identities = 167/242 (69%), Gaps = 5/242 (2%) Strand=Plus/Minus Query 25023 AATAGT-GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGA 25081 |||||| || | |||||||| || ||||||| | ||||| || ||||||||| || Sbjct 437 AATAGTAGTTGAGATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGA 378 Query 25082 AACGGAACCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGT 25141 ||| || | || || | | || |||| |||||| ||||| |||||| | Sbjct 377 GGTTGAATCCTCCGACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTAT 318 Query 25142 GCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGAT--TCCAAAACT 25199 || ||| |||||| | ||||| || || || || ||||| |||||| || | || Sbjct 317 CCCACCAGACCAACAACGTCTTATTTTCGCTGGTAAGCAATTAGAAGATGGTCGTACCCT 258 Query 25200 ATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGA 25259 | | |||||||| || ||||||||||||||| | || | || | || ||||| || Sbjct 257 TT--CTGATTACAACATCCAAAAGGAATCTACTTTACATCTTGTCCTTCGTTTACGTGGT 200 Query 25260 GG 25261 || Sbjct 199 GG 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410382965614412