Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq53685 138 2e-27 seq48397 105 1e-17 >seq53685 Length=437 Score = 138 bits (152), Expect = 2e-27 Identities = 172/236 (73%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 |||||||| ||| | || || || || || || || || || | ||| ||||| | Sbjct 424 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 365 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || || ||| ||| | ||| |||||||||||||| |||||||| ||||| || ||| Sbjct 364 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAA 305 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 ||| | |||||||| || || || |||||||| ||| |||| || | ||||| || Sbjct 304 CAACGTCTTATTTTCGCTGGTAAGCAATTAGAAGATGGTCGTACCCTTTCTGATTACAAC 245 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTAAAAA 124774 || ||||| ||||| ||||| ||| | || | |||||||| |||||| ||| || Sbjct 244 ATCCAAAAGGAATCTACTTTACATCTTGTCCTTCGTTTACGTGGTGGTGGTAAGAA 189 >seq48397 Length=377 Score = 105 bits (116), Expect = 1e-17 Identities = 166/238 (70%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 124533 AATACAATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAA 124592 |||| |||||||| || | || || || || || || |||||||| | ||| |||| Sbjct 354 AATAAGATGCAAATTTTCGTCAAAACCCTTACTGGAAAGACTATAACCCTTGAGGTTGAG 295 Query 124593 GCAAATGATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCT 124652 | || | ||| ||| | || | || |||||||| || |||||||| ||||| Sbjct 294 TCTTCCGACAGTATTGTCAATGTTAAGAACAAGATTCAAGAAAAGGAAGGTATTCCACCA 235 Query 124653 GATCAACAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGAT 124712 || |||||| | | ||||| || || ||||||||||| ||| |||| | || Sbjct 234 GACCAACAACGTTTAATTTTCGCCGGTAAACAATTAGAAGATGACAGAACCCTTTCTGAC 175 Query 124713 TATAATATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTATTA 124770 || || |||||||| ||||| ||| | || | ||| | ||| | || |||||||||| Sbjct 174 TACAACATTCAAAAGGAATCTACTCTTCACCTTGTTCTCCGTCTTCGTGGTGGTATTA 117 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 754675443974400