Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq3918 91.5 1e-13 >seq3918 Length=790838 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 16259 TCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCTCGTTTTTTA 16318 || ||||| |||||||||||||| ||||||||||| ||||| | ||| | || || Sbjct 705761 TCATCCCTGCTTATTAACTCGTTGCTGAATGTAAGACCAGGCATAATTCCCCTCTTCTTC 705820 Query 16319 ATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCGGCAAATGCA 16378 | ||| ||||| || ||||| |||||| ||||| || ||||| || || || || || Sbjct 705821 AGCCAGAATATGGCAGCAAAGCTACCAGAGAAGAAAATCCCTTCTACAGCAGCGAAAGCT 705880 Query 16379 ACCAATCGCTCACCGTACGTTCTAtttttact-ttctatccattttttagcccaatttgc 16437 | | || |||| | | || | | || | | ||||| || | ||||||| || Sbjct 705881 ATAACTCTCTCAGC-AAAGTCGGAATCTTGGTCCCCAATCCAGTTGATGGCCCAATCAGC 705939 Query 16438 tttttgtttAACACAGTTCATGTTCTCTATTGCATTAAA 16476 || | ||| ||||| |||| |||| || ||||| || Sbjct 705940 CTTCTTTTTGACACATGGCATGGTCTCAATGGCATTGAA 705978 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 15931 CATAACTGACATTTTTTGATATTCACTAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTC 15990 ||||||| ||| || || ||||| | ||||| || ||||||||||| || |||||||| Sbjct 704803 CATAACTCCCATCTTCTGGTATTCTCCAACTCGTTTCTCAAAGAAATTGGTCTTTCCTTC 704862 Query 15991 TAATGAAATATTTTCCATAAAATCAAAAGGATTTT 16025 ||||| || | |||||||| ||||| || |||| Sbjct 704863 CAATGAGATCTGCTCCATAAAGTCAAATGGGTTTT 704897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462034121038800