Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq5158 95.1 9e-15 >seq5158 Length=501596 Score = 95.1 bits (104), Expect = 9e-15 Identities = 175/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Plus Query 18069 AAAATTAAAAATACATTTTCTTTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGT 18128 |||||| || | | ||| | ||| | |||||||| |||| ||||| | || ||| Sbjct 429077 AAAATTGAACACAAATTGTTAATTTACTGTCCTCCCCTCAGTCGGAGTACAAGATGGAGT 429136 Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188 || || || || || ||||||||||| | | ||| | |||||||| ||||| || Sbjct 429137 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGTGTGCGGCCATCTTCCAGCTGTTTACCA 429196 Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248 ||| ||||||| | || || || ||| | ||||| || || |||| ||| Sbjct 429197 GCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCTTTGTCCTGGATTTTAGCCTTC 429256 Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308 || | | ||| || ||| || || |||| ||||||| |||| || || | ||| Sbjct 429257 ACATTTTCAATAGAGTCTGATGGTTCAACCTCAAGGGTGATGGTTTTCCCTGTGAGGGTT 429316 Query 18309 TTTACAAAAATTTGCAT 18325 |||||||| |||||||| Sbjct 429317 TTTACAAAGATTTGCAT 429333 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| |||| ||||| | || ||||| || || || || ||||||||||| | Sbjct 429335 CCTCCCCTCAGTCGGAGTACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAA 429394 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||||| ||||| || ||| ||||||| | || || || ||| Sbjct 429395 AGTGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 429454 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || |||| ||| || | | ||| || ||| || || Sbjct 429455 ATTCCTTCTTTGTCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACC 429514 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| |||| || || | ||||||||||| |||||||| Sbjct 429515 TCAAGGGTGATGGTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 429561 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| |||| ||||| | || ||||| || || || || ||||||||||| | Sbjct 429563 CCTCCCCTCAGTCGGAGTACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAA 429622 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||||| ||||| || ||| ||||||| | || || || ||| Sbjct 429623 AGTGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 429682 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || |||| ||| || | | ||| || ||| || || Sbjct 429683 ATTCCTTCTTTGTCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACC 429742 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| |||| || || | ||||||||||| |||||||| Sbjct 429743 TCAAGGGTGATGGTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 429789 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| |||| ||||| | || ||||| || || || || ||||||||||| | Sbjct 429791 CCTCCCCTCAGTCGGAGTACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAA 429850 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||||| ||||| || ||| ||||||| | || || || ||| Sbjct 429851 AGTGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 429910 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || |||| ||| || | | ||| || ||| || || Sbjct 429911 ATTCCTTCTTTGTCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACC 429970 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| |||| || || | ||||||||||| |||||||| Sbjct 429971 TCAAGGGTGATGGTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 430017 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 ||||||| |||| ||||| | || ||||| || || || || ||||||||||| | Sbjct 430019 CCTCCCCTCAGTCGGAGTACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAA 430078 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | ||| | |||||||| ||||| || ||| ||||||| | || || || ||| Sbjct 430079 AGTGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGA 430138 Query 18219 ACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTT 18278 | ||||| || || |||| ||| || | | ||| || ||| || || Sbjct 430139 ATTCCTTCTTTGTCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACC 430198 Query 18279 TCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 |||| ||||||| |||| || || | ||||||||||| |||||||| Sbjct 430199 TCAAGGGTGATGGTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 430245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378961850988210