Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3918 107 3e-18 >seq3918 Length=790838 Score = 107 bits (118), Expect = 3e-18 Identities = 137/188 (73%), Gaps = 3/188 (2%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 |||||||||| ||| || ||||||||| | |||||||||||||| | |||||||| ||| Sbjct 707714 TTTCCCATCAAGTACCACGACATTTGGAAGATGTACAAAAAGGCAGAAGCCTCCTTCTGG 707655 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | || || || ||||||||||| ||| || || | ||||||| | ||| || Sbjct 707654 ACTGCTGAGGAAGTAGATCTGTCCAAAGACATGAACCACTGGGAGAACC---TGAAGGAC 707598 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 ||| | | || || ||||| | | || |||||||| | | |||||||| ||| Sbjct 707597 GATGAAAAACATTTCATCTCGCATGTACTTGCATTCTTTGCTGCCAGTGATGGAATTGTC 707538 Query 125178 AACGACAA 125185 || || || Sbjct 707537 AATGAGAA 707530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740293519108080