Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq53685 89.7 3e-13 >seq53685 Length=437 Score = 89.7 bits (98), Expect = 3e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 33141 CACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAG 33200 |||| || | ||| || | || | ||| || || || || ||||| || |||||||||| Sbjct 196 CACCACCACGTAAACGAAGGACAAGATGTAAAGTAGATTCCTTTTGGATGTTGTAATCAG 255 Query 33201 ACAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGG 33260 | | | | || || |||||||| ||| || || | |||||| ||||| | | Sbjct 256 AAAGGGTACGACCATCTTCTAATTGCTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTG 315 Query 33261 GTATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAA 33320 | || ||||| || || ||| ||| || ||| ||| |||||| || || || Sbjct 316 GGATACCTTCCTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAA 375 Query 33321 CGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 | || || || || || || |||||||| ||||| || || |||||||| Sbjct 376 CCTCAAGGGTAATGGTCTTACCCGTAAGGGTTTTGACAAAGATTTGCAT 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318456465238884