Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_006658.1 Length=30655 Score E Sequences producing significant alignments: (Bits) Value seq123 80.6 5e-11 >seq123 Length=1704129 Score = 80.6 bits (88), Expect = 5e-11 Identities = 155/225 (69%), Gaps = 8/225 (4%) Strand=Plus/Plus Query 3920 ACTTATACTTAAAGACTGATGTCCTTCTCTTGACTGATGTCTTTGAAAACTTTAGACGTA 3979 |||| || ||||| || ||||| |||||| | || ||||||||| | || |||||| || Sbjct 1640441 ACTTGTATTTAAAAACAGATGTGCTTCTCCTAACAGATGTCTTTAAGAATTTTAGAACTA 1640500 Query 3980 GTTGTTTCAAGACATACAATTTAGACGCACTACACTTTTATAC-AGCACCAGGTCT---T 4035 |||||||| || ||||| | || || ||||| ||| || ||||| | Sbjct 1640501 CGTGTTTCAATTATTATGGATTAGATCCGTGCCAATTCTATACTAGCCCC-GGTCTAGCT 1640559 Query 4036 TCGAACGCTGCAATGTTAAAGCATACTGAAGTAGAACTTGAACTGTTAACTGATCCTGAG 4095 | ||| || ||| ||||| || | || ||| | ||| | |||| ||||| || Sbjct 1640560 TGGAATGCAGCA---TTAAAAATGACAGGTGTGGAATTAGAATTACTAACCGATCCGGAC 1640616 Query 4096 ATGCTTCTTTTCATTGAAAAGGGTGTTCGCGGTGGGGTATCGATG 4140 ||| ||| ||| |||| ||||||||||| || ||||| ||| Sbjct 1640617 ATGTATCTATTCTTTGAGGGTGGTGTTCGCGGCGGCGTATCTATG 1640661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97878231880532