Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq53685 120 3e-22 seq48397 96.9 3e-15 >seq53685 Length=437 Score = 120 bits (132), Expect = 3e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| ||||||||||| || ||||| || ||||||||| | || || ||| | Sbjct 424 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 365 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 |||||| ||| | | || ||| |||||| ||||| ||||| |||| || || Sbjct 364 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAA 305 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 ||| | ||||||| || || || ||||||||||||| ||| | | ||||| ||| Sbjct 304 CAACGTCTTATTTTCGCTGGTAAGCAATTAGAAGATGGTCGTACCCTTTCTGATTACAAC 245 Query 115466 ATTCAAAAAGAGTCTACTATACAT 115489 || ||||| || |||||| ||||| Sbjct 244 ATCCAAAAGGAATCTACTTTACAT 221 >seq48397 Length=377 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||||||||| |||||||| || || ||||| || || ||| | || ||||| Sbjct 351 AAGATGCAAATTTTCGTCAAAACCCTTACTGGAAAGACTATAACCCTTGAGGTTGAGTCT 292 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 ||||| | ||| | || || | || ||| || || ||||| | || || Sbjct 291 TCCGACAGTATTGTCAATGTTAAGAACAAGATTCAAGAAAAGGAAGGTATTCCACCAGAC 232 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 || ||| | | |||| || || ||||||||||||||||||| |||| | | || || Sbjct 231 CAACAACGTTTAATTTTCGCCGGTAAACAATTAGAAGATGACAGAACCCTTTCTGACTAC 172 Query 115463 AACATTCAAAAAGAGTCTACT 115483 ||||||||||| || |||||| Sbjct 171 AACATTCAAAAGGAATCTACT 151 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424915510846960