Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq53685 86.0 4e-12 seq4225 84.2 2e-11 >seq53685 Length=437 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| ||| | ||||| | ||||| || ||||||||| | || ||| || | Sbjct 424 ATGCAAATCTTTGTCAAAACCCTTACGGGTAAGACCATTACCCTTGAGGTTGAATCCTCC 365 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | || |||||| ||||| || ||| | || | ||||| Sbjct 364 GACACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATCCCACCAGACCAA 305 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | ||||| || ||||| || ||| |||||||| || | | |||||||| Sbjct 304 CAACGTCTTATTTTCGCTGGTAAGCAATTAGAAGATGGTCGTACCCTTTCTGATTACAAC 245 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGG 22060 || || |||||||||||| | ||| | || | |||||||| || || Sbjct 244 ATCCAAAAGGAATCTACTTTACATCTTGTCCTTCGTTTACGTGGTGG 198 >seq4225 Length=872099 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 21949 ACCAACAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATT 22008 |||| ||| | || ||||||||||| ||||| || |||||| | || || |||| | Sbjct 364574 ACCAGCAGCGTCTCATCTTTGCTGGTAAACAGCTGGAAGATGGACGTACATTGTCCGACT 364515 Query 22009 ACAATATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGATATTAA 22067 |||| || |||||||| || || || ||| |||| || ||| | ||||||||| | ||| Sbjct 364514 ACAACATCCAGAAGGAGTCCACACTCCATTTGGTGTTGCGTCTCCGAGGAGGAAACTAA 364456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357764027090932