Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3345 102 2e-16 seq3918 96.9 6e-15 >seq3345 Length=2905891 Score = 102 bits (112), Expect = 2e-16 Identities = 148/204 (73%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 213762 AGTCCCGGACAGGATGCGGGACACATGAGGCTCCAGTCCCCGTCAT-CTCTGACTCTCTG 213820 || || ||||| ||||||||||||||| ||||||| | | | |||| ||||||| Sbjct 2713848 AGCCCTGGACACTCTGCGGGACACATGAGCGTCCAGTCTTCATTGTTCTCT-ACTCTCTT 2713906 Query 213821 CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCAC 213880 ||| || ||||| |||| |||||| ||| || ||||| | | ||| |||| ||| Sbjct 2713907 CATAAATAGGTCGGGGATCCACAGTGCGTAAAATAGGTCACGAGCCCTATTCTCCTCCTT 2713966 Query 213881 TCCAG-AGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGT 213939 ||| | | ||||| ||| || | |||||| || || || ||||| || |||| || Sbjct 2713967 TCCCGTATTTTTTTTACAG-TCCAAAAAGTCGAACATATCACAATGCCATGGTTCCAAGT 2714025 Query 213940 AGATGGCAAAGGCGCCCGGCCTCT 213963 | ||||||||||| || || |||| Sbjct 2714026 AAATGGCAAAGGCTCCTGGTCTCT 2714049 >seq3918 Length=790838 Score = 96.9 bits (106), Expect = 6e-15 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 || |||| ||| || | | ||||| ||| ||||||||||| | ||||||| || Sbjct 705761 TCATCCCTGCTTATTAACTCGTTGCTGAATGTAAGACCAGGCATAATTCCCCTCTTCTTC 705820 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 |||||||| || || || || ||||||||||| || || || || || ||||| || Sbjct 705821 AGCCAGAATATGGCAGCAAAGCTACCAGAGAAGAAAATCCCTTCTACAGCAGCGAAAGCT 705880 Query 48275 GTGAGCCTCTCTCCG-AAAGAAGCGTTCTT-GTCTGAGATCCAGGAAAGCGCCCAGTCTG 48332 | | ||||||| | |||| | |||| ||| |||||| | ||||| || | Sbjct 705881 ATAA--CTCTCTCAGCAAAGTCGGAATCTTGGTCCCCAATCCAGTTGATGGCCCAATCAG 705938 Query 48333 CCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 ||||||| |||| |||||||| ||||| ||||| Sbjct 705939 CCTTCTTTTTGACACATGGCATGGTCTCAATGGC 705972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 930570317022720