Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3345 95.1 2e-14 >seq3345 Length=2905891 Score = 95.1 bits (104), Expect = 2e-14 Identities = 173/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Plus Query 221933 TCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACAC 221992 || ||| |||||| ||| |||||||| || || | ||| | || ||||||||| Sbjct 2713800 TCGTACTTGGTATAAAGCTCTTCAAACTTGTCCCCCCAGCAGTCGGCGAGCCCTGGACAC 2713859 Query 221993 CTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCC 222052 ||||||||||| || |||||| | |||| | || |||| ||| || ||||| Sbjct 2713860 TCTGCGGGACACATGAGCGTCCAGTCTTCATTGTTCTCTACTCTCTTCATAAATAGGTCG 2713919 Query 222053 GGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCC-ACGCCGTTGTTTTT 222111 ||||||||||| || | ||| || || | | || | ||||||| |||| ||||| Sbjct 2713920 GGGATCCACAGTGCGTAAAATAGGTCACGAGCCCTATTCTCCTCCTTTCCCGTATTTTTT 2713979 Query 222112 CCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGC 222171 ||| |||||||| || || || ||| ||||| || |||| || | ||| | || Sbjct 2713980 TTACAG-TCCAAAAAGTCGAACATATCACAATGCCATGGTTCCAAGTAAATGGCAAAGGC 2714038 Query 222172 GCCGGGTCGCT 222182 || |||| || Sbjct 2714039 TCCTGGTCTCT 2714049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 927885094331520