Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq53685 116 7e-21 seq48397 116 7e-21 seq5158 91.5 3e-13 >seq53685 Length=437 Score = 116 bits (128), Expect = 7e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171866 ATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCATCCAATTG 171925 ||||||||||| || || || || ||||| || | | || | || || ||||| Sbjct 221 ATGTAAAGTAGATTCCTTTTGGATGTTGTAATCAGAAAGGGTACGACCATCTTCTAATTG 280 Query 171926 TTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTT 171985 |||||||| ||||| | | |||||||| ||||| || ||||| |||||||| ||||| Sbjct 281 CTTACCAGCGAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGAATTTT 340 Query 171986 ATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 172045 | ||| ||||| ||||| || || ||||| || || || |||||||| ||||| || Sbjct 341 AGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATGGTCTTACCCGT 400 Query 172046 TAATGTTTTAATGAATATCTGCAT 172069 | ||||| | || || ||||| Sbjct 401 AAGGGTTTTGACAAAGATTTGCAT 424 >seq48397 Length=377 Score = 116 bits (128), Expect = 7e-21 Identities = 171/242 (71%), Gaps = 0/242 (0%) Strand=Plus/Plus Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896 ||||||||||| | ||| || | || | || | ||||| || || ||| || || Sbjct 116 ATAATACCACCACGAAGACGGAGAACAAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAG 175 Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956 || || | | || || || || ||||||||||| || |||||||| | |||||||| Sbjct 176 TCAGAAAGGGTTCTGTCATCTTCTAATTGTTTACCGGCGAAAATTAAACGTTGTTGGTCT 235 Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016 ||||| || ||||| || ||||| || || || || ||||| ||| | || || || Sbjct 236 GGTGGAATACCTTCCTTTTCTTGAATCTTGTTCTTAACATTGACAATACTGTCGGAAGAC 295 Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTATTA 172076 || || || || || || || || ||||| | ||||| | ||| || ||||| ||||| Sbjct 296 TCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACGAAAATTTGCATCTTATTT 355 Query 172077 TA 172078 || Sbjct 356 TA 357 >seq5158 Length=501596 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| |||||||||||||| || | | ||| ||||| || || ||||||||||| Sbjct 429179 TCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCTTTG 429238 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || |||||| || ||||| |||| ||||| | ||| || || || || ||| Sbjct 429239 TCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACCTCAAGGGTGATG 429298 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | ||||| | || || ||||| Sbjct 429299 GTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 429333 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| |||||||||||||| || | | ||| ||||| || || ||||||||||| Sbjct 429407 TCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCTTTG 429466 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || |||||| || ||||| |||| ||||| | ||| || || || || ||| Sbjct 429467 TCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACCTCAAGGGTGATG 429526 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | ||||| | || || ||||| Sbjct 429527 GTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 429561 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| |||||||||||||| || | | ||| ||||| || || ||||||||||| Sbjct 429635 TCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCTTTG 429694 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || |||||| || ||||| |||| ||||| | ||| || || || || ||| Sbjct 429695 TCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACCTCAAGGGTGATG 429754 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | ||||| | || || ||||| Sbjct 429755 GTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 429789 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| |||||||||||||| || | | ||| ||||| || || ||||||||||| Sbjct 429863 TCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCTTTG 429922 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || |||||| || ||||| |||| ||||| | ||| || || || || ||| Sbjct 429923 TCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACCTCAAGGGTGATG 429982 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | ||||| | || || ||||| Sbjct 429983 GTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 430017 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| |||||||||||||| || | | ||| ||||| || || ||||||||||| Sbjct 430091 TCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCTTTG 430150 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || |||||| || ||||| |||| ||||| | ||| || || || || ||| Sbjct 430151 TCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCAACCTCAAGGGTGATG 430210 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | ||||| | || || ||||| Sbjct 430211 GTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 430245 Score = 91.5 bits (100), Expect = 3e-13 Identities = 113/155 (73%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||| || ||||||||||| || | | ||| ||||| || || ||||||||||| Sbjct 430319 TCTTCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCTGGGGGAATTCCTTCTTTG 430378 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 || || |||||| |||||||| |||| ||||| | ||| || || || || || Sbjct 430379 TCCTGGATTTTAGCCTTTACATTTTCAATAGAGTCTGATGGTTCAACCTCAAGGGTGATA 430438 Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 ||||| || || | ||||| | || |||||||| Sbjct 430439 GTTTTTCCTGTGAGGGTTTTTACAAAGATCTGCAT 430473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904200790856400