Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq81145 91.5 2e-12 seq1021 91.5 2e-12 >seq81145 Length=3262 Score = 91.5 bits (100), Expect = 2e-12 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 |||| | || ||||||||||| || |||||| | | | ||| | |||||| ||| Sbjct 2719 TGATGCAGGCAGCCAACTACCTAGATATCAAGGGTTTATTGGATGTAACATGCAAGACTG 2660 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297 |||||||||||||||| ||||| || || ||||| ||| | || || ||||| |||||| Sbjct 2659 TGGCCAACATGATCAAAGGCAAATCACCTGAGGAAATCAGAAAAACTTTTAATATCAAGA 2600 Query 1592298 ACG 1592300 ||| Sbjct 2599 ACG 2597 >seq1021 Length=408601 Score = 91.5 bits (100), Expect = 2e-12 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 1592178 TGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTG 1592237 |||| | || ||||||||||| || |||||| | | | ||| | |||||| ||| Sbjct 216703 TGATGCAGGCAGCCAACTACCTAGATATCAAGGGTTTATTGGATGTAACATGCAAGACTG 216644 Query 1592238 TGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGT 1592297 |||||||||||||||| ||||| || || ||||| ||| | || || ||||| |||||| Sbjct 216643 TGGCCAACATGATCAAAGGCAAATCACCTGAGGAAATCAGAAAAACTTTTAATATCAAGA 216584 Query 1592298 ACG 1592300 ||| Sbjct 216583 ACG 216581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6100355897432586