Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq3918 93.3 7e-13 >seq3918 Length=790838 Score = 93.3 bits (102), Expect = 7e-13 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 796187 CCAGGTTCTCAGCCACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAA 796246 ||| ||||||| || || || || ||||| || || || || || || ||| ||| | Sbjct 707525 CCAAGTTCTCATTGACAATTCCATCACTGGCAGCAAAGAATGCAAGTACATGCGAGATGA 707584 Query 796247 AGTGACGCTCGTCGTCGCTGAGCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCT 796306 | || || ||||| | || |||||||| | |||| | || || || | Sbjct 707585 AATGTTTTTCATCGTCCTTCAGGTTCTCCCAGTGGTTCATGTCTTTGGACAGATCTACTT 707644 Query 796307 CCTCGGCGGTCCAAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGC 796366 |||| || ||||| |||||||| || |||||||||||||||| ||| || ||||| Sbjct 707645 CCTCAGCAGTCCAGAAGGAGGCTTCTGCCTTTTTGTACATCTTCCAAATGTCGTGGTACT 707704 Query 796367 GGATGGGGAACAGAACAAAGCGATTGGGGTTCTCGCGTAGCAGCGGCTC 796415 |||||| || | |||||||||| || || || ||||| ||||| Sbjct 707705 TGATGGGAAATACAACAAAGCGACGTGGATTGTCCTTCAGCAGTGGCTC 707753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7907453691536862