Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq5158 122 7e-23 seq48397 104 2e-17 >seq5158 Length=501596 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 29557 TGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCC 29616 ||||||||||||| || || || | ||| || ||||| || || || ||||| || || Sbjct 429104 TGTCCTCCCCTCAGTCGGAGTACAAGATGGAGTGTGGACTCCTTCTGGATGTTGTAGTCA 429163 Query 29617 GCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGC 29676 | | ||||| ||| || || ||||| |||||| | || | | ||||| || || Sbjct 429164 GAGAGTGTGCGGCCATCTTCCAGCTGTTTACCAGCAAAGATAAGACGCTGCTGGTCTGGG 429223 Query 29677 GGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCT 29736 ||||| || |||||||| || | ||| || ||| |||| | || ||| || |||| Sbjct 429224 GGAATTCCTTCTTTGTCCTGGATTTTAGCCTTCACATTTTCAATAGAGTCTGATGGTTCA 429283 Query 29737 ACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || ||||| || || ||||| || || | |||||| ||||| || ||||| Sbjct 429284 ACCTCAAGGGTGATGGTTTTCCCTGTGAGGGTTTTTACAAAGATTTGCAT 429333 >seq48397 Length=377 Score = 104 bits (114), Expect = 2e-17 Identities = 155/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || || | ||||| || ||||| ||||||||||| || || | || ||| | Sbjct 133 ACGGAGAACAAGGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAAAGGGTTCTGTC 192 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | |||||| || || | || || | ||| || || || |||||||| || || Sbjct 193 ATCTTCTAATTGTTTACCGGCGAAAATTAAACGTTGTTGGTCTGGTGGAATACCTTCCTT 252 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||||| | || | || ||| | | | | |||| ||| || || ||||| ||||| Sbjct 253 TTCTTGAATCTTGTTCTTAACATTGACAATACTGTCGGAAGACTCAACCTCAAGGGTTAT 312 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 ||| || ||||| | |||||| || || || ||||| ||| Sbjct 313 AGTCTTTCCAGTAAGGGTTTTGACGAAAATTTGCATCTTA 352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 384831132344778