Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mizuhopecten_20yessoensis_20[genbank_20GCA_5F002113885.2_202017-06- 12] 82,658 sequences; 987,568,220 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3918 107 2e-18 >seq3918 Length=790838 Score = 107 bits (118), Expect = 2e-18 Identities = 145/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 4930 CTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATA 4989 |||| ||||| || || || || || |||||||| ||||| || || | ||||| || | Sbjct 707522 CTACCAAGTTCTCATTGACAATTCCATCACTGGCAGCAAAGAATGCAAGTACATGCGAGA 707581 Query 4990 TAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 | || | | ||| || ||| || || | ||||||| || ||||| | | ||| | Sbjct 707582 TGAAATGTTTTTCATCGTCCTTCAGGTTCTCCCAGTGGTTCATGTCTTTGGACAGATCTA 707641 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGAT 5109 |||| ||| ||||||| || || ||||| || ||||||||||| |||||| || | | Sbjct 707642 CTTCCTCAGCAGTCCAGAAGGAGGCTTCTGCCTTTTTGTACATCTTCCAAATGTCGTGGT 707701 Query 5110 ACTGAATCGGAAGTATGACAAA 5131 ||| || |||| || ||||| Sbjct 707702 ACTTGATGGGAAATACAACAAA 707723 Score = 100 bits (110), Expect = 2e-16 Identities = 102/133 (77%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 4801 TTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATAT 4860 ||| || ||||| | || || ||||| || |||| || ||||||||||| || || | Sbjct 706225 TTTGAACAGGGTCCTTGATGTATGTGTCGATAAGTAAACTGTACATTTCAGAGTGAATGT 706284 Query 4861 TTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTAC 4920 | || ||||| || || |||||||| || ||||| ||||||||| |||||||||| || | Sbjct 706285 TCTCCATAGCTATTTGGAATCCGTAGAAACATCTTGCTTCTGTTGCTTGAACTTCTTTGC 706344 Query 4921 AAAATCTTTCTAC 4933 ||||| || || Sbjct 706345 TGAATCTCTCCAC 706357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426619392635114