Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq2395 86.0 1e-11 >seq2395 Length=207026 Score = 86.0 bits (94), Expect = 1e-11 Identities = 163/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 135595 TATACAGATAAAGACGAGTGGACTACGTGGaaaaaaaTACCCGATCCTGTTTTGCATATA 135654 || || || |||||||||||| |||||| | || || ||| ||| | || || Sbjct 119319 TACACGGACAAAGACGAGTGGGAAACGTGGCACAATATCGGCGACAAAGTTCTCCACATT 119260 Query 135655 GAACTTAGGAGATGGGCGGATGTTTTTATTATAGCGCCCTTAACGGCAAATACGTTAGCA 135714 || || || | ||||| || | | ||||||| |||| || || || | ||| Sbjct 119259 GAGCTGAGACGTTGGGCTGACATGATGCTTATAGCACCCTGTGATGCTAACACAATGGCA 119200 Query 135715 AAAATAGCTAATGGTATATGCGATAATTTACTGACGTCTATTGTAAGAGCCTGGGATACA 135774 ||||| | || || || || || ||| | || || | | |||| ||||| |||||| | Sbjct 119199 AAAATGTCCAACGGAATTTGTGACAATCTCCTTACATGTGTTGTCAGAGCGTGGGATCAA 119140 Query 135775 AACAAACCACTCATTTTCTGTCCTGCAATGAATACTCTTATGTGGGAACATCCTATTACA 135834 || |||||| | | | |||||| || ||||| || |||||| ||||||| || ||| Sbjct 119139 AATAAACCATTGCTGTACTGTCCGGCCATGAACACAGCCATGTGGCAACATCCCATCACA 119080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 923137946204000