Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq392 82.4 1e-10 >seq392 Length=28663 Score = 82.4 bits (90), Expect = 1e-10 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 33858 TCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAG 33917 || |||| |||||||||||||| || |||| ||| || || || | || || |||||| Sbjct 16628 TCAATCAGGAGACTATACATTTCAGAGTGAACGTTCTCGATCGCAACTTGGAAACCGTAG 16569 Query 33918 AAACATCTAGCCTCGGTAATCTGCACTTCT 33947 |||||||| ||||| |||| ||||||||| Sbjct 16568 AAACATCTCGCCTCTGTAACTTGCACTTCT 16539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629777449128000