Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq789 109 1e-18 >seq789 Length=365404 Score = 109 bits (120), Expect = 1e-18 Identities = 173/248 (70%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 363997 TGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTAT 364056 ||||| | || || || |||||| ||||| ||| |||| ||||||||||| | | Sbjct 30121 TGGTCTTTGTTCTGTCCCAACGAATCACCAGGACTTCAAGATGCGTGGGGTGACGAGTTT 30180 Query 364057 GTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAG 364116 | | |||||||| ||||| ||||| || || || || || |||||| Sbjct 30181 GAGAAATTGTACGAAAAATATGAGCGCGAGGGCCGAGCCCGCAAAACGATCAAGGCACAG 30240 Query 364117 AAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATGTTGTAC 364176 || ||||||||||| ||||| || ||||||||||| || || || || ||| ||||| Sbjct 30241 AAACTATGGTTTGCTATCATCGACAGTCAGATTGAGACGGGGACGCCGTACATGGTGTAC 30300 Query 364177 AAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAAC 364236 || ||| | ||||| | ||| ||||||||| || | || || || | |||||| Sbjct 30301 AAGGATGCTAGCAACAGGAAGAGTAACCAGCAGAACTTGGGAACCATCAAATGTAGCAAC 30360 Query 364237 CTATGTAC 364244 || ||||| Sbjct 30361 CTCTGTAC 30368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303268433988200