Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq789 87.8 3e-12 >seq789 Length=365404 Score = 87.8 bits (96), Expect = 3e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062 ||||||| ||||||||| || || ||||| | || | ||| | |||||||| || | Sbjct 30009 ACCCTCTTCATGAAGAGATCTGGAATCCATAAAGCGTAGAATAAGTCCCTGGCCCGGGCC 29950 Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122 || || ||||||||||| ||||| |||| || ||||| | || ||||||| || Sbjct 29949 TCTTCTTTTCCAGTGTTCTTTCTCAGTTCCAGGAAATCAAAAATATCAGCGTGCCACGGT 29890 Query 245123 TCCATGTAGACAGCGA 245138 |||| ||||| ||||| Sbjct 29889 TCCAGGTAGATAGCGA 29874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944278998376000