Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq968 120 3e-22 >seq968 Length=289341 Score = 120 bits (132), Expect = 3e-22 Identities = 147/201 (73%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||| ||||| |||||||| || | || || ||| || || |||||||| || Sbjct 47476 GTTGACTCCTTTTGGATATTGTAGTCACTCAGAGTTCGACCGTCTTCCAGCTGTTTACCG 47535 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| ||||||||| || || ||||| || || |||||||||||| ||||| |||| Sbjct 47536 GCGAAGATCAATCTTTGTTGGTCGGGTGGGATTCCCTCCTTGTCCTGAATTTTGGCCTTG 47595 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| | ||| | | ||| ||||| | || | ||||| || |||||||| Sbjct 47596 ACGTTCTCGATCGAGTCAGAAGGCTCAACTTCCAGAGTGATAGTTTTTCCAGTCAGAGTC 47655 Query 127097 TTTACAAAAATCTGCATGGCT 127117 || ||||| ||||||||| || Sbjct 47656 TTGACAAAGATCTGCATGCCT 47676 Score = 104 bits (114), Expect = 2e-17 Identities = 164/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 126880 TACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTA 126939 ||||| ||| || | | || || ||||| || | || ||||| || ||||| ||||| Sbjct 46427 TACTG-TCCTCCTCTCAGTCTCAGGACCAAGTGAAGAGTTGACTCCTTCTGAATGTTGTA 46485 Query 126940 ATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATC 126999 ||| | || ||||| ||| || | ||| || |||||| |||||| || || ||||| Sbjct 46486 ATCACTCAGAGTGCGGCCATCCTCCAACTGCTTGCCAGCGAAGATCAGACGTTGTTGATC 46545 Query 127000 GGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACT 127059 |||||| || || || ||||| ||||||| ||| | | |||| | || | Sbjct 46546 GGGAGGAATTCCTTCTTTGTCTTGGATTTTCGCCTTTACGTTCTCGATCGAATCGGATGG 46605 Query 127060 CTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| ||||||| ||| | || ||||| |||| || || || || |||||||| Sbjct 46606 CTCAACTTCGAGGGTAATGGTCTTGCCAGTCAAGGTCTTCACGAAGATCTGCAT 46659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475470486824000