Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq968 131 2e-25 seq1485 89.7 5e-13 >seq968 Length=289341 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | ||||| || || ||||| || ||||| |||||||||||||| || || Sbjct 47443 ATTCCTCCTCTCAGCCTTAAGACGAGATGGAGAGTTGACTCCTTTTGGATATTGTAGTCA 47502 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| | || |||| ||||| || ||| | ||||||| ||| ||||| || Sbjct 47503 CTCAGAGTTCGACCGTCTTCCAGCTGTTTACCGGCGAAGATCAATCTTTGTTGGTCGGGT 47562 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || || || || || || |||||||| |||| || | || | | ||| |||| ||| Sbjct 47563 GGGATTCCCTCCTTGTCCTGAATTTTGGCCTTGA-CGTTCTCGATCGAGTCAGAAGGCTC 47621 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | ||||| || || ||||| || ||||| || ||||| Sbjct 47622 AACTTCCAGAGTGATAGTTTTTCCAGTCAGAGTCTTGACAAAGATCTGCAT 47672 >seq1485 Length=353179 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184 ||||||||| | |||||||| ||| || ||||| || || || || | |||| | Sbjct 325287 CCTCAACACCAAGTGCAGCGTGCTTTCTTTCTGGATGTTGTAGTCACTAAGGGTTCGACC 325228 Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | || || || ||| | || | || || || || || || || |||||||| Sbjct 325227 ATCTTCTAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCTGGGGGGATACCTTCTTT 325168 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 |||||||| || || | ||| | | |||| || |||||| || || || | Sbjct 325167 GTCTTGAATCTTAGCCTTAACATTTTCGATTGAGTCGCTAGGCTCGACCTCTAGGGTGAT 325108 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || || || ||||| ||||||||||||||| Sbjct 325107 TGTCTTACCCGTGAGGGTTTTGACAAAAATTTGCATC 325071 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451974384796000