Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq789 93.3 5e-14 >seq789 Length=365404 Score = 93.3 bits (102), Expect = 5e-14 Identities = 177/257 (69%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 ||||| | |||| || || || || ||||| |||| ||||||||||| |||||| Sbjct 30368 GTACAGAGGTTGCTACATTTGATGGTTCCCAAGTTCTGCTGGTTACTCTTCCTGTTGCTA 30309 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||||| | |||||| |||||||||||||| |||| | || || || | Sbjct 30308 GCATCCTTGTACACCATGTACGGCGTCCCCGTCTCAATCTGACTGTCGATGATAGCAAAC 30249 Query 106643 CACA-CATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 106700 || | || | | | || | | ||| ||| || ||||| ||| || ||| || Sbjct 30248 CATAGTTTCTGTGCCTTGATCGTTTTGCG--GGCTCGGCCCTCGCGCTCATATTTTTCGT 30191 Query 106701 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 106760 | | |||||||| |||||| ||| || || ||||||| | || ||||||| Sbjct 30190 ACAATTTCTCAAACTCGTCACCCCACGCATCTTGAAGTCCTGGTGATTCGTTGGGACAGA 30131 Query 106761 AAAGAGACCATTGACCA 106777 | | |||||||| |||| Sbjct 30130 ACAAAGACCATTCACCA 30114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589943188724000