Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq392 82.4 9e-11 >seq392 Length=28663 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 19345 ACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATA 19404 |||| ||||| |||||||||||||| || || ||||| || |||| || || ||| Sbjct 14531 ACCAGGTTTTCGTTAACTATTCCATCGCTGGCAGCAAAGAAAGCTAGGACGTGAGAAATG 14472 Query 19405 AAATGTTTTTCATCTGAGGTTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACT 19464 ||||||||||||||| | | ||| | ||||||| | || ||| | || ||| Sbjct 14471 AAATGTTTTTCATCTCTTTTCAGTGTCTCCCAATCACCCAAGTCCTTACTGAGGTCCACT 14412 Query 19465 TCTTCAACTGTCCAAAAAGAAGC 19487 ||||| ||||||| || ||||| Sbjct 14411 TCTTCGGCTGTCCAGAATGAAGC 14389 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562072965564000