Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq789 84.2 4e-11 >seq789 Length=365404 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 213813 ACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTC 213872 || |||| |||||| || || || | ||| | ||| ||| | |||||||| || | Sbjct 30009 ACCCTCTTCATGAAGAGATCTGGAATCCATAAAGCGTAGAATAAGTCCCTGGCCCGGGCC 29950 Query 213873 TCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGC 213932 || || ||||| ||| || | ||| || || || ||||| || || ||||||||||| Sbjct 29949 TCTTCTTTTCCAGTGTTCTTTCTCAGTTCCAGGAAATCAAAAATATCAGCGTGCCACGGT 29890 Query 213933 TCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||| |||||| || || | ||| || |||| Sbjct 29889 TCCAGGTAGATAGCGAATGAGCCAGGTCTCT 29859 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931473414784000