Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq789 91.5 7e-14 >seq789 Length=365404 Score = 91.5 bits (100), Expect = 7e-14 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 25929 TCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTT 25988 ||| ||| || | |||||||||||| | || || ||||| || || || | |||| Sbjct 30005 TCTTCATGAAGAGATCTGGAATCCATAAAGCGTAGAATAAGTCCCTGGCCCGGGCCTCTT 29946 Query 25989 CTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCT 26047 ||||||| ||| |||||| | || || | ||||||||||||||| | |||||| ||||| Sbjct 29945 CTTTTCCAGTG-TTCTTTCTCAGTTCCAGGAAATCAAAAATATCAGCGTGCCACGGTTCC 29887 Query 26048 AAATAGATAGCAAA 26061 | |||||||| || Sbjct 29886 AGGTAGATAGCGAA 29873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253024271982500