Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq622 111 2e-18 >seq622 Length=442810 Score = 111 bits (122), Expect = 2e-18 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||||||| ||||||| || || ||||| || ||||||||| ||||| ||| | Sbjct 212483 ACACTCTTTGAGCTGATCCTTGCTGCTAACTATCTGGACATCAAGGGACTGCTTGATGTC 212424 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 || ||| | ||||| |||||||| ||||| ||| | ||||| |||||||||||| Sbjct 212423 ACCTGTAAGACAGTGGCTAACATGATTAAGGGAAAGAAAGCAGAGGAAATCCGCAAGACC 212364 Query 1592285 TTTAACATCAAGTACG 1592300 || ||||||||| ||| Sbjct 212363 TTCAACATCAAGAACG 212348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106720670116700