Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq622 105 1e-16 >seq622 Length=442810 Score = 105 bits (116), Expect = 1e-16 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 2035614 GTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCC 2035673 || |||||| || ||||||||| ||||||| || || ||||| || ||||||||| Sbjct 212495 GTGGACCAAGGAACACTCTTTGAGCTGATCCTTGCTGCTAACTATCTGGACATCAAGGGA 212436 Query 2035674 CTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGAC 2035733 || || ||| | || ||||| ||||| ||| | || ||||| ||| | ||||| Sbjct 212435 CTGCTTGATGTCACCTGTAAGACAGTGGCTAACATGATTAAGGGAAAGAAAGCAGAGGAA 212376 Query 2035734 ATCCGCAAGACCTTTAACATCAAGTACG 2035761 |||||||||||||| ||||||||| ||| Sbjct 212375 ATCCGCAAGACCTTCAACATCAAGAACG 212348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915703889738900