Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq1132 89.7 5e-13 >seq1132 Length=63760 Score = 89.7 bits (98), Expect = 5e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 39785 TGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATCCCCGGT 39843 |||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct 34058 TGGTGTAGTGGTTATCACGTCTGCTTTACACGCAGAAGGTCCCGGGTTCAATCCCCGGT 34116 Score = 84.2 bits (92), Expect = 2e-11 Identities = 54/59 (92%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 39785 TGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATCCCCGGT 39843 |||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||| Sbjct 33440 TGGTGTAGTGGTTATCACATCTGCTTTACACGCAGAAGGTCCCGGGTTCAATCCCCGGT 33382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466095084544000