Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq789 105 8e-18 >seq789 Length=365404 Score = 105 bits (116), Expect = 8e-18 Identities = 187/269 (70%), Gaps = 4/269 (1%) Strand=Plus/Minus Query 111296 GTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCAC 111355 ||||| | |||| || || || || ||||| |||| |||||||||||| |||||| Sbjct 30368 GTACAGAGGTTGCTACATTTGATGGTTCCCAAGTTCTGCTGGTTACTCTTCCTGTTGCTA 30309 Query 111356 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTC 111415 ||||||||||| | |||||| |||||||||||||| |||| | || ||||| | Sbjct 30308 GCATCCTTGTACACCATGTACGGCGTCCCCGTCTCAATCTGACTGTCGATGATAGCAAAC 30249 Query 111416 CA-AACATCGGCGGC-TGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGT 111473 || | || | | | || | | ||| ||| || ||||| ||| || ||| || Sbjct 30248 CATAGTTTCTGTGCCTTGATCGTTTTGCG--GGCTCGGCCCTCGCGCTCATATTTTTCGT 30191 Query 111474 AGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGA 111533 | | |||||||| |||||| ||| || || ||||||| | || ||||||| Sbjct 30190 ACAATTTCTCAAACTCGTCACCCCACGCATCTTGAAGTCCTGGTGATTCGTTGGGACAGA 30131 Query 111534 AAAGAGACCATTGACCACCTTCCTCAACC 111562 | | |||||||| |||| | |||| ||| Sbjct 30130 ACAAAGACCATTCACCATTTGCCTCGACC 30102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627991962960000