Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mnemiopsis_20leidyi_20[genbank_20GCA_5F000226015.1_202011-09-19] 5,100 sequences; 155,865,547 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq789 86.0 7e-12 >seq789 Length=365404 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906 ||||| ||| ||| || | || ||| | |||||||| |||||||||||| ||||||| Sbjct 30245 TATGGTTTGCTATCATCGACAGTCAGATTGAGACGGGGACGCCGTACATGGTGTACAAGG 30304 Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGGCGTCATCAAATCGAGCAACTTAT 53966 || | |||| |||||| |||||| ||||| | || |||||||| |||||| | | Sbjct 30305 ATGCTAGCAACAGGAAGAGTAACCAGCAGAACTTGGGAACCATCAAATGTAGCAACCTCT 30364 Query 53967 GT 53968 || Sbjct 30365 GT 30366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547181114980000