Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq35982 104 2e-17 >seq35982 Length=112201 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||||||||| ||||| | || || ||||| || ||| | || || ||| | Sbjct 104192 ATGCAGATATTTGTGAAAACACTGACAGGGAAAACTATCACCCTTGAAGTAGAACCTTCA 104251 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| ||| |||| ||||| | ||||| || | || || ||| Sbjct 104252 GACACTATCGAAAATGTAAAGGCCAAAATCCAGGATAAAGAGGGAATTCCTCCAGATCAG 104311 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||| | || | ||| ||||||||| | |||||| || || || |||| | Sbjct 104312 CAACGTCTTATCTTTGCTGGCAAACAATTAGAAGATGGTCGTACATTGTCAGACTACAAC 104371 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || ||||||||| | || |||||||| || ||| ||||| | ||||| Sbjct 104372 ATCCAGAAAGAGTCAACACTTCATTTGGTCTTAAGATTGAGAGGAGG 104418 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| || || || ||||| | || || ||||| ||||| | || || ||| | Sbjct 104876 ATGCAAATTTTCGTCAAAACACTTACTGGAAAAACAATAACACTTGAAGTGGAACCATCT 104935 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | | |||| || || | |||||| | |||||||| | || || ||| Sbjct 104936 GACACTATCGAAAACGTAAAAGCTAAAATTCAAGATAAAGAAGGTATTCCTCCAGATCAG 104995 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 |||||| | || | ||| || |||||| | |||||| || || ||||| | | Sbjct 104996 CAACGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTCGTACATTGTCGGATTATAAC 105055 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || ||||||||| ||||||||||||| || || ||||| | |||||| Sbjct 105056 ATCCAGAAAGAGTCCACGCTTCATTTGGTCTTGAGATTGAGAGGAGGT 105103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 417923820880160