Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq24796 87.8 9e-13 >seq24796 Length=5980 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 447 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 388 Query 11528 CC 11529 || Sbjct 387 CC 386 Score = 87.8 bits (96), Expect = 9e-13 Identities = 56/62 (90%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || Sbjct 5558 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAACCGG 5499 Query 11528 CC 11529 || Sbjct 5498 CC 5497 Score = 82.4 bits (90), Expect = 4e-11 Identities = 50/54 (93%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCT 11521 |||||||||| |||| |||||||||||||||||||||||| |||||||||||| Sbjct 54 GGATCGAACCCACGACATTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCT 1 Lambda K H 0.641 0.410 0.925 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261253541516548