Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq20678 104 2e-17 >seq20678 Length=151248 Score = 104 bits (114), Expect = 2e-17 Identities = 81/94 (86%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 115585 ||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||| Sbjct 60745 TGTCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATTGTACGATCTAAGGA 60686 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || ||||||||||| ||| || Sbjct 60685 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 60652 Score = 104 bits (114), Expect = 2e-17 Identities = 81/94 (86%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 114388 ||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||| Sbjct 60745 TGTCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATTGTACGATCTAAGGA 60686 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || ||||||||||| ||| || Sbjct 60685 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 60652 Score = 104 bits (114), Expect = 2e-17 Identities = 81/94 (86%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 115528 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 115585 ||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||| Sbjct 72303 TGTCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATTGTACGATCTAAGGA 72244 Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 115619 |||| ||||||| || ||||||||||| ||| || Sbjct 72243 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 72210 Score = 104 bits (114), Expect = 2e-17 Identities = 81/94 (86%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 114331 TGTCATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGA 114388 ||||||||||| |||||||||||||||| |||||||||||| ||| |||||||||| Sbjct 72303 TGTCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAGGATTGTACGATCTAAGGA 72244 Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATC 114422 |||| ||||||| || ||||||||||| ||| || Sbjct 72243 ACCATAACTGATTTAATGAGCCATTCGCGGTTTC 72210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396701526487546