Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq11254 84.2 2e-11 >seq11254 Length=169933 Score = 84.2 bits (92), Expect = 2e-11 Identities = 174/258 (67%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 95110 ATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACC 95169 |||||||| || | ||||| || || | || |||||||| ||| ||||||| | || Sbjct 72940 ATGCCCACAGCGACAACGGCACAACTCTTGGGTAACAACGAATCGATCGAACCTTATACT 72999 Query 95170 TCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTC 95229 ||| | |||| ||| |||| || | || || || | || ||||| | || || Sbjct 73000 AGTAACATTTACACCAGAAGGGTCCTGTCTGGAGAGTTTCAGGTGGTCAACCATCATCTG 73059 Query 95230 CTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC 95289 | || |||||| |||||| ||||| ||| | |||| ||| | | | Sbjct 73060 ATTCGAGACCTGTGCGATCTGGGACTGTGGAACGACGACCTCAAAAACGAGATCATT--- 73116 Query 95290 GCCAACGGC---TCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTAC 95346 |||||||| ||||| || ||||| | ||||| || |||| |||| |||||| Sbjct 73117 GCCAACGGAGGTTCCGTGCAAAACATTGCCAGTATACCCCAGCACATTAAGGACCTCTAC 73176 Query 95347 AAGACCGTGTGGGAGATC 95364 |||||||||||||| ||| Sbjct 73177 AAGACCGTGTGGGAAATC 73194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494262037585080