Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq11254 140 5e-28 >seq11254 Length=169933 Score = 140 bits (154), Expect = 5e-28 Identities = 536/830 (65%), Gaps = 14/830 (2%) Strand=Plus/Minus Query 159648 TCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGT 159707 |||| || ||||||||||| ||||| |||| ||| || |||||||| || || | Sbjct 70936 TCTTTTCAAAAAAGTTGGTTTTGCCTTCCAGGGAGATGTTCTCCATGAAATTAAACGGAT 70877 Query 159708 TCTTCACG---TG-ATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACA 159763 | | ||| || | || ||| || || | | | | ||||| ||||| || ||| Sbjct 70876 T--TGACGAATTGTACAGTTTTTCATAATTC--AAATCTGTCAGCAGTCTGTCGGCTACA 70821 Query 159764 AATTCGATGTAGCTACACATC-TGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGC 159822 ||||| ||||| |||||| || | ||| || || | ||| | ||||| | ||| Sbjct 70820 AATTCAATGTACTGCCACATCATGGTGTT-GTTCATTCCAATCAGTTTGACGGGTAACGC 70762 Query 159823 TTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAG-ACACGTT 159881 ||||| || |||||| | || ||| || || || | ||| |||| || | || | | Sbjct 70761 TTCCGTCAAAAACTCTTGTTCTATCAAAACGGCATCCGACACGATCT-CGTGTACCCTAT 70703 Query 159882 CGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCA 159941 | | || || | | |||||| || || || ||||| ||||| | |||| | Sbjct 70702 TCTGCGAGGGTTTATGCTTCAGGTGGTCGTTGAAAAGTAGGCAGGCAAATTGATAGTGTA 70643 Query 159942 GTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCG 160001 || || |||| | ||| | ||||||| | | | |||||||||| || || Sbjct 70642 AACCTTCATCCCTACTGATTAGCTCGTTGCTGAACGTTAAACCCGGCATGAGACCTCGTT 70583 Query 160002 GTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAA 160061 || | ||||||||| || |||||| ||| ||| ||||| || || || | |||| Sbjct 70582 TCTTTAACCAAAAAATTGCAGCAAAACTACCAGAAAAGAAGATGCCTTCTACCACGGCAA 70523 Query 160062 ACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATT 160121 | || | || | | | ||||| | | | || || |||| || ||||||||| Sbjct 70522 ATGCTAGCAGTCGCACGGCAAAATTAGAATCAGAATCGTGTATCCAATTTATGGCCCATT 70463 Query 160122 CAGCCTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCT 160181 |||||||| | ||| || ||| || | ||||| | ||| ||| || | | Sbjct 70462 TGGCCTTCTTCTGAACGCAAGGTATGGTTTCTATTGCGTTTAGCAA-CTGGTCTTTACGT 70404 Query 160182 TCAC-ATCCTTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCG 160240 || ||| || || | |||| | |||| | ||||||||| | ||| | ||||| Sbjct 70403 ACAGGATCTTTAATAAAAGTATCTATCATCAAGCTGTACATTTCAGAGTGTATGTTTTCC 70344 Query 160241 ATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAAC 160300 ||||| |||||||| ||| ||| || | || || || |||| || || | ||| Sbjct 70343 ATGGCAATCTGAAATCCGTAAAAAGATTTGGCTTCTGGAAACTGGACTTCATTACAAAAC 70284 Query 160301 CTTTGACCCAGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGA 160360 || || | || || | ||||| | |||||| || ||||||||||||| | | Sbjct 70283 CTCTGTGCTAGGTTTTCGTTAACGATGCCGTCGCTTGCAGCAAAGAAAGCCAGAATGGAC 70224 Query 160361 GAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCC 160420 || ||||| | | || | || ||| | | | || | ||| | | || ||| | | Sbjct 70223 GAAATGAACTTGCGTTCTTTTTCGTTCAATTTGTTCTGCCAATCTTGAACATCTACTGAC 70164 Query 160421 AAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACAT 160470 || ||||||||||| | |||||| | |||| | || |||||||| Sbjct 70163 AAGTCAACCTCTTCTACAGTCCAATACGAAGCCAGGGCCTGCTTGTACAT 70114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794413986140880