Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq9175 89.7 6e-13 >seq9175 Length=65522 Score = 89.7 bits (98), Expect = 6e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 ||||||| | ||| | || ||||| | ||| || || || ||||||||||| ||| Sbjct 22882 CCTCCTCGGAGACGGAGTACAAGATGGAGTGTTGATTCTTTCTGAATATTGTAGTCAGAT 22941 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || || | | || || || || || ||||| || ||||| | ||| ||||| | || Sbjct 22942 AGTGTTCTACCATCTTCAAGTTGTTTTCCGGCAAAGATCAATCTCTGTTGGTCTGGTGGA 23001 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | ||| |||||| ||| || |||| || | | || || | ||| || Sbjct 23002 ATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTATCTGATGGTTCAACT 23061 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | ||||||||| ||||| |||| ||||| || ||||||||||| Sbjct 23062 TCTAGCGTGATGGTCTTGCCAGTCAATGTTTTGACGAAGATTTGCAT 23108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564711505959960